Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRAFLNRSFAPLLNPNENLLDQVKSSIILKKGVSYFDWGASGLASALVEKRVKSLLPYYANAHSVASKHAILMGMLLKECQEKLKRSLNLSANHCVLSAGYGASSAIKKFQEILGVCIPSKTKKNLEPYLKDMALKRVIVGPYEHHSNEVSWREGL---CEVVRIPLNEHGLLDLEILEQTLKKTPNSLVSVSAASNVTGILTPLKEVSSLCKEY--RAILALDLANF--SAHANPKDCEYQTGFYAPHKLLGGVGGCGLLGISKDLIDTQIPPSFSAGGVIKYANRTRHEFIDELPLREEFGTPGLLQFYRSALAYQLRDECGLDFIHKKENNLLRVLVYGLKDLPAINIYGNLTASRVGVVAFNIGGISPYDLARVLSYEYAIETRAGCSCAGPYGHDLLNLNAQKSSDFNAKPGWLRVSLHFTHSINDIDYLLDSLKKAVKKLR |
| 1ECX Chain:A ((1-376)) | MRVYFDNN------------------------------ATTRVDDRVLEEMIVFYREKYGNPNSAH-GMGIEANLHMEKAREKVAKVLGVSPSEIFFTSC---------ATESINWILKTVAETFEKRK------RTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDED-TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGP-KGVGITYIRKG---VPIRPLIHGGGQER---------------GLRSGTQNVPGIVGAARAMEIAVE-ELSEAAKHMEKLRSKLVSGLMNLGA-HIITPLEISLPNTLSVSFPNIRGSTLQNLLSGY-------GIYVST-------HVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ECX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190053 for 3104 contacts (-61.2/contact) +
2D Compatibility (PS) -38961 + (NN) -17900 + (LL) 5752
1D Compatibility (HY) -18800 + (ID) 3850
Total energy: -263812.0 ( -84.99 by residue)
QMean score : 0.457
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