Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHTLIERLEKVTNSKELEEARLNALGKKGVFADKFNQLKNLNGEEKNAFAKEIHHYKQAFEKAFELKKKAIMELELEERLKKEKIDVSLFNAIKTSSSHPLNYTKNKIIEFFTPLGYK---------LEIGSLVEDDFHNFSALNLPPYHPARDMQDTFYFKDHKLLRTHTSPVQIHTMQEQTPPIKMICLGETFRCDY-DLTHTPMFHQIEGLVVDQKGNI---------------------------------RFTHLKGVIEDFLHYFFG-GVKLRWRSSFFPFTEPSAEVDISCVFCKQEGCRVCSHTGWLEVLGCGMVNNAVFEAIGYENVSGFAFGMGIERLAMLTCQINDLRSFFETDLRVLESF------------------------------------------------------------------------------------------------------------ |
3CMQ Chain:A ((11-415)) | ------------------PGSVVELLGKSYPQDDHSNLT-------------------------------------------RKVLTRVGRNLHNQQHHPLWLIKERVKEHFYKQYVGRFGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLNRTHMLRAHTSAHQWDLLHAGLD--AFLVVGDVYRRDQIDSQHYPIFHQLEAVRLFSKHELFAGIKDGESLQLFEQSSRSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFPFTHPSFEMEINF------------HGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLERLAMILYDIPDIRLFWCEDERFLKQFCVSNINQKVKFQPLSKYPAVINDISFWLPSENYAENDFYDLVRTIGGDLVEKVDLIDKFVHPKTHKTSHCYRITYRHMERTLSQREVRHIHQALQEAAVQLLGVEGRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CMQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150958 for 1951 contacts (-77.4/contact) +
2D Compatibility (PS) -26263 + (NN) -4353 + (LL) 6864
1D Compatibility (HY) -20800 + (ID) 4050
Total energy: -199560.0 ( -102.29 by residue)
QMean score : 0.296
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