Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRYQNMFETLKKHKKMAFIPFVTLGDPNYELSFEIVKTLIISGVSALELGLAFSDPVADGTTIQASHLRALKHA-SMAKNFQLLKKIRGYNHDIPIGLLAYANLIFSYGVDGFYAQAKECGVDSVLIADMPLIEKELVIKSAQKHQIKQIFIASPNASSKDLEQVATHSQGYIYTLARSGVTGASHTLENDASAIIKTLKTFSSTPALLGFGISKKEHITNAKGMGADGVICGSALVKIIEENLNNEDAMLEKIKGFVGGMIS
1WQ5 Chain:B ((3-262))
-RYESLFAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSDPL-----IQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMYANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVT--ENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKA
General information:
TITO was launched using:
RESULT:
Template:
1WQ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -183161 for 2038 contacts (-89.9/contact) +
2D Compatibility (PS) -27486 + (NN) -14386 + (LL) 180
1D Compatibility (HY) -24000 + (ID) 5850
Total energy: -254703.0 ( -124.98 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_1WQ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WQ5-query.scw
PDB file :
Tito_Scwrl_1WQ5.pdb
: