Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVTRFKKAFISYSLGVLVVSLLLNVCNASAQEVKVKDYFGEQTIKLPVSKIAYI-GSYVEVPAMLNVWDRVVGVSDYAFKDDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLVVTFVGNPKAVEHAKKFG--ISFLSFQETTIAEAMQAMQAQATVL--EIDASKKFAKMQETLDFIAERLKGVKKKKGVELFHKANKISGHQAISSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPEIIFIWWVSPLTP-----EDVLNNPKFSTIKAIKNKQVYKLPTMDIGGPRA-PLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEIEPFLWH |
| 2CHU Chain:A ((10-296)) | ----------------------LPISMSDEGDSFLVKDSLGENKIPKNPSKVVILDLGILDTFDALKLNDKVVGVPAKNLPKYLQQFK---------NKPSVGGVQQVDFEAINALKPDLIIISGRQSKFYDKLKEIAPTLFVGLDNANFLSSFENNVLSVAKLYGLEKEALEKISDIKNEIEKAKSIVDEDKKALIILTNSNKISAFGPQSRFGIIHDVLGINAVDENI---KGKSINSEFILEKNPDYIFVVDRNVILGNKERAQGILDNALVAKTKAAQNKKIIYLDPEYWYLASGNGLESLKTMILEIKNAVK----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CHU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97120 for 2218 contacts (-43.8/contact) +
2D Compatibility (PS) -28953 + (NN) -12292 + (LL) 5652
1D Compatibility (HY) -10400 + (ID) 2650
Total energy: -145763.0 ( -65.72 by residue)
QMean score : 0.411
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