Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDGVPQTDFGYYDNMDVHYTWSIPNSTNVKAGDTMDFTLPSQLALATDLAFDVKDSKGQVVGTATVKKATNQVTLVFSDYVEKHSDVKGELDFWTAFNQKVITGNETVDLVFPLENGTTVIDVEVGEKTPVSPTETLFKYGWVDASNPSLIHWVVRVNYAKVNIPNAVFTDIIGAKQTLNFDSIKAFHGTYSADRVFTAGAPISSTNFSATSDGFSVALGNLTDSVQISYTTTTTDGGKSTQYDNTAKLAGTDFVTKQTSTWTPASGGGGEGGGTTGSVTLTKEDAKTKATL-EGAEFKLVDSKGTVLQENITTNASGQLSIADLKFDTYQLIETKAPTGYKLDTTPVEFTIGENNQAITVTKENTLNTGSVEL-TKLDAATKATLAGATFELQDKEGNTLQTDLKTDENGVLKVTDLVPGSYQFVETSAPTGYKLDNSPVSFEVIAGETDQVVKVTKENTLEVGSVELTKLDSATKATLAGATFELQDKEGNTLQTDLKTDE-NGVLKVTDLVPGSYQFVETSAPTGYKLDNS-PVSFEVVAGETDQVVKVTKENTLEVGSVELTKLDSATKATL-AGATFELQDKEGNTLQTG-----LTTDENGVLKVTDLVPGTYQFVETKAPIGYELDTTPVSFEIVAGETDPIVKVTKENTLVPPTPVPPTPVPPTPVPPTPVPPTPLPPVPYEPTVPPTKPEVPVTPKKTENSEDSPKTTPIRITQSLPKTGDTNSFAGLGVILIALSLSGLLLKRK |
3KPT Chain:A ((6-355)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRGAVDLIKTGVNEK--AMAGAVFSLFKKDGTEVKKELATDANGHIRVQGLEYGEYYFQETKAPKGYVIDPTKREFFVKNS---GTINEDGTITSGTVVKME------------------------------VKNNEEPTIDKKINGKLEALPINPLTNYNYDIKTLIPEDIKEYKKYVVTDTLDNRLVIQGKPIVKIDGAE---VNANVVEVAIEGQKVTATVKDFTKMDGK---KEFHLQIKSQVKEGVPSGSEILNTAKIHFTNKNDVIGEKESKPVVVIPTTGIIELTKIDSANK-NKMKGAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWSNIPYGDYQIFETKAPTYTKEDGTKTSYQLLKDPIDVKISENNQTVKLTIENNKS---------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 62161 for 2486 contacts (25.0/contact) +
2D Compatibility (PS) -36110 + (NN) 1351 + (LL) 22244
1D Compatibility (HY) -8400 + (ID) 4350
Total energy: 36896.0 ( 14.84 by residue)
QMean score : 0.332
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