Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------MSTRVMYPAEIKEKAIKMKLAGKSTKEIMRTLNIKNPTQVK-TWWRWYRNEETHRFHQGVGKQYKYQKGVPELPEIEQLKIALRQKELELEILKKYKALERK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4OCV Chain:A ((24-378)) | TNEALFDVASHFALEGTVDSIEPYGDGHINTTYLVTTDGPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGKETLDIVRTTSGDTWAEIDGGAWRVYKFIEHTMSYNLVPNPDVFREAGRAFGDFQNFLSGFDANQLT-ETIAHFHDTPHRFEDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVGELRDSITAREAELLPFSGNLLTMECGMRFLADYLEGDVYFATKYPEHNLVRSRTQIKLVREMEQRADETRAIVADVMETT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22260 for 486 contacts (45.8/contact) +
2D Compatibility (PS) -10642 + (NN) -1091 + (LL) 176
1D Compatibility (HY) -3200 + (ID) 750
Total energy: 6753.0 ( 13.90 by residue)
QMean score : 0.303
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