Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQILLVDGYNVIGAWPELSYLKDRDLEAARDKLVEWMAEYQSYTGYRVVVVF---DAQFVRGVKRKSKKYQVEVVFTHEDETADEYIEQKAIEWKNVRTQIMVATSDYTEQWAIFGQGALRISSRELLFEIQEMSKQIGKKIKRI--QEEMPKSNLNLDSDVISQLEKWRRGEE---------
2L82 Chain:A ((1-162))
MSQIFVVFSSD--------------------PEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIVTTDD--KEWIKDFIEEAKERGVEVFVVYNNKDDDRRKEAQQEFRSDGVDVRTVSDKEELIEQVRRFVRKVGSLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2L82.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32848 for 1134 contacts (-29.0/contact) +
2D Compatibility (PS) -16105 + (NN) -3905 + (LL) 1728
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -57180.0 ( -50.42 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_2L82.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L82-query.scw
PDB file :
Tito_Scwrl_2L82.pdb
: