Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VDNSVNQEELAMLELARSGDTEALEYFFSKYQSVIYWKSTQYFLQGAERDDLIQEAMIGLFKAIRDYDKTKEASFRSFAEMCIN-RQLLSAVKRASRQKNIPLNNSVSLDTPMAEDDVDWTLLDVISEKAAETPEDFLIKNEDLTHVARQLEQVTSEFEKEVLKQYLEGKSYQEMALFFNKK----EKAIDNALQRVKKKMMKQLE |
1GZS Chain:B ((1-165)) | GSLTNKVVKDFMLQTLNDID----------------------IRGSASKDPAYASQTREAILS-AVYSKNKDQCCNLLISKGINIAPFLQEIGEAAKNAGLPGTTKNDVFTP-SGAGANPFITPLISSANSKYPRMF-----------------INQHQQASFKIYAEKIIMTEVAPLFNECAMPTPQQFQLILENIANKYIQNTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GZS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26484 for 1113 contacts (23.8/contact) +
2D Compatibility (PS) -18010 + (NN) -14334 + (LL) 4324
1D Compatibility (HY) -3200 + (ID) 1400
Total energy: -6136.0 ( -5.51 by residue)
QMean score : 0.464
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