Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSKKLVSIIFLGICLLLVGCGKEVVDSKYTGKWKLESSGIGMSDGSNYKETDAAGKVSLDLDIDAEGNVKELYIDDAVAITNSYKLKKKGDDEYQYDGTLISKKVYSYETESD-KENVETMLKFLKSKDNVKITKNEQKGDEYHIDVKADEKDFVFSLEMQSGKLIFKKVDTKEKVLIKETYKKN----------------------------- |
4MR0 Chain:A ((114-571)) | TALSVKDYGAVGDGIHDDRQAIQDAIDAAAQGLGGGNVYFPEGTYLVKEIVFLKSHTHLELNEKATILNGINIKNHPSIVFMTGLFTDDGAQVEWGPTEDISYSGGTIDMNGALNEEGTKAKNLPLINSSGAFAIGNSNNVTIKNVTFKDSYQGHAIQIAGSKNVLVDNSRFLGQALPKTMKDGQIISKESIQIEPLTRKGFPYALNDDGKKSENVTIQNSYFGKSDKSGELVTAIGTHYQTLSTQNPSNIKILNNHFDNMMYAGVRFTGFTDVLIK-GNRFDKKVKGESVHYRESGAALVNAYSYKNTK--DLLDLNKQVVIAENIFNIADPKTKAIRVAK-------DSAEYLGKVSDITVTKNVINNNSKETEQPNIELLRVSDNLVVSENSIFGGKEGIVIEDSKGKITVL------NNQFYNLSGKYISFIKSNANGKEPVISDGNFNIVTENGLYKIVTNNLSDKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MR0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32416 for 1336 contacts (24.3/contact) +
2D Compatibility (PS) -17932 + (NN) 2076 + (LL) 936
1D Compatibility (HY) -3200 + (ID) 1450
Total energy: 12846.0 ( 9.62 by residue)
QMean score : 0.177
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