Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQYKIKEMPLEELEPKVVEGLLE---HK------ERLG-YNIP----KKDTEYIGFAALSEVGEMVGGVTAKIS------YGELHVSLLSVDPSTQGSGVGTELMAQIERYGRANSCHHISLTT--FSYQAPEFYRKCGFTELGRVKDFPIKGEEKYFFIKYL
3I9S Chain:A ((23-183))
-SVEIKRVDKHHCLDLVGIFIELERYYFGDKAASEQDLANYLSHQVFSEHSGVKVIAA-VEHDKVLGFATYTIMFPAPKLSGQMYMKDLFVSSSARGKGIGLQLMKHLATIAITHNCQRLDWTAESTNPTAGKFYKSIGASLIREKEYYRFEGNGLNKLAKSL
General information:
TITO was launched using:
RESULT:
Template:
3I9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30541 for 854 contacts (-35.8/contact) +
2D Compatibility (PS) -14944 + (NN) -2248 + (LL) 384
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -54349.0 ( -63.64 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_3I9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I9S-query.scw
PDB file :
Tito_Scwrl_3I9S.pdb
: