Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKGLKKMKYS-IQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTNP----ANIRRIMSNLKKANLITTQTGKANPILTKPPEEISLLDVYKSIEGNTNLIHVDPKTNPDCIVGANIQQVLSSKYELLQQKIELEMDEIKLDSIIHDISVLESKDRPQNNEFITKFL
1MZB Chain:A ((3-136))
MVENSELRKAGLKVTLPRVKILQMLDSAQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRH----------------------NFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNLVLYVRKKK-----------
General information:
TITO was launched using:
RESULT:
Template:
1MZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32714 for 821 contacts (-39.8/contact) +
2D Compatibility (PS) -14042 + (NN) -6563 + (LL) 1776
1D Compatibility (HY) -6000 + (ID) 550
Total energy: -58093.0 ( -70.76 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_1MZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MZB-query.scw
PDB file :
Tito_Scwrl_1MZB.pdb
: