Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAFDLEDFLTTAITDYAKEKVEAGTWDEEESLAKSQDSFNKLLYDGITTPNEYLYSIIS-GEKIGYIWFHVDETRSGKHAFIYDFVIFEAFRGKGFGTKTLAALDVLAK-EMQITKIGLHVFAHNQTAIGLYNKVGFQNTDITMAKYL
3OWC Chain:A ((69-156))
-----------------------------------------------------LLWSACRDDQVIGHCQLLFDRR--NGVVRLARIVLAPSARGQGLGLPMLEALLAEAFADADIERVELNVYDWNAAARHLYRRAGFREEGL------
General information:
TITO was launched using:
RESULT:
Template:
3OWC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65571 for 532 contacts (-123.3/contact) +
2D Compatibility (PS) -9276 + (NN) -2611 + (LL) 4236
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -79172.0 ( -148.82 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_3OWC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OWC-query.scw
PDB file :
Tito_Scwrl_3OWC.pdb
: