Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKHYDYIAIGGGSGGIASINRAAMHGAKCAL---IEPKF------LGGTCVNVGCVPKKVMWYGAQIKEAMDLYADAYGYQVD-ASFNFQKLVENREAYIERIRGSYKNGLDNNNVDWIKGYAEFVDEKTLR--VNGEL-----VTADHILIATGGEPALPS-IPGA-EFGITSDGFFALKELPKKVAVVGAGYIAVELAGVLQQLGSETHLFVRKHAPLRNFDPLLTDTLTEIIEQSDMTLHKHAIPQKVEKNPDGSLTLSLEDGRTETVDTLIWAIGRKPVIKGLQIEKSGVELLESGH-IAVDKFQNTNVAGIYAVGDVTGHY-ELTPVAIAAGRRLSERLFNNKKDAHLNYENIPTVVFSHPAIGTVGLTEPEAIEKYGKENIKVYTSSFTSMYTAITDHREP--CRMKLIC-EGKTERVIGLHGIGYGVDEMIQGFAVAINMGATKADFDNTVAIHPTGSEEFVTMK |
4J57 Chain:B ((42-519)) | ----YDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS-IVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTK-MDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDS-DEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLEISAV-HR--STCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCIGIHPTDAESFMNL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J57.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257896 for 3715 contacts (-69.4/contact) +
2D Compatibility (PS) -47344 + (NN) -8476 + (LL) 400
1D Compatibility (HY) -43600 + (ID) 8900
Total energy: -365816.0 ( -98.47 by residue)
QMean score : 0.490
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