Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQASFVVIDETGIHARPATLLVQAASKYSSDVQIEYTGKKVNLKSIMGVMSLGIGKGADITIYTEGSDEKEAIEGLTEVLKKEGLAE
1KA5 Chain:A ((1-86))
MEQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDESDAIQAISDVLSKEGL--
General information:
TITO was launched using:
RESULT:
Template:
1KA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62792 for 706 contacts (-88.9/contact) +
2D Compatibility (PS) -9618 + (NN) -6010 + (LL) 248
1D Compatibility (HY) -11600 + (ID) 3150
Total energy: -92922.0 ( -131.62 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_1KA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KA5-query.scw
PDB file :
Tito_Scwrl_1KA5.pdb
: