Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLLKDKFGRVHDYIRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFMELMVKFGIKKVRIT--GGEPLLR-----TDIVEIVRGLGAIPEIEDISITTNAMYL-AKKAEALKEAGLTRVNISLD---SLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLI-KGQNDDEITDFLRFTKDKDINIRFIEYMPI--GHAGTSWKEKYLPLDTIFEACNEAGYEYEPVDSIRGNGPSENFRIKGAKGTFGVIHPVSAHFCDSCNRLRLTA-DGYIKACLYW-DEEMNIRPFIQDPVKLM---QLVQKAIDNKPENHEMALKLQDEVQSNKPTWR-RMSQIGG-------------------------------------------- |
4K36 Chain:A ((2-392)) | ---------PPLSLLIKPASSGCNLKCTYCFYHSLSDNVKSYGIMRDEVLESMVKRVLNEANGHCSFAFQGGEPTLAGLEFFEKLMELQRKHNYKNLKIYNSLQTNGTLIDESWAKFLSENKF-LVGLSMDGPKEIHNLNRKDCCGLDTFSKVERAAELFKKYK---VEFNILCVVTSNTARHVNKVYKYFKE--KDFKFLQFINCLDPLYEEKGKYNYSLKPKDYTKFLKNLFD-FWYEDFLNGNRVSIRYFDGLLETILLGKSSSCGMNGTCTCQFVVESDGSVYPCDFYVLDKWRLGNIQDMTMKELFETNKNHEFIKLSFKVHEECKKCKWFRLCKGGCRRCRDSKEDSALELNYYCQSYKEFFEYAFPRLINVANNIVDKLAAALEHHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91826 for 2406 contacts (-38.2/contact) +
2D Compatibility (PS) -33306 + (NN) -7454 + (LL) 992
1D Compatibility (HY) -12800 + (ID) 2350
Total energy: -146744.0 ( -60.99 by residue)
QMean score : 0.329
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