Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MAYPIKYIENNLVFNNDGECFAYYELIPYNYSFLSPDEKYQVHDNFRQLVAQSRDGKIHALQLATESSIRATQERSKLEVKGRLKEVAHRK---IDEQTEALVSMIGDNQVDYRFFIGFKLLLNEQELSIQSVSQEIKKAVQEFLNGVNHKLMGDFVSMS-NAEIDRFSKMENLLESKISRRFKIRKLDKNDFGYI-IEHIYGQTGTPYEEYEYHLPKKYQDKEVLV-KKYDILKPTRCL-IDESQR-YLKIIHEDETTYVAYFTINSIVGELDFPSSEIFYYQQQQFTFPIDT-SMNVEIVANKKALTTVRNKKKELKD--------LDSHAWESDNETSNNVIDALDSVNELETTLDQSKESMYKLSYVV--RVSAKDLDELKRRCDEVKDFYDDLSIKLVRPFGD----M-LGLHGEFIPASKRYINDYIQYVTSDFLAGLGFGATQTLGEHEGIYVGYNLDTG-KNVYLKPALASQGVKGSVTNALASAFIGSLGGGKSFSNNMLVYYAVLFGGQAVIVDPKAERGKWKETLPEIAHEINIVNLTSDDENKGL-L-DPYVILSR-KKDSESLAIDILTFLTGISSRDSDKF-----PVLRKAIRNVTQSEQRG-LLLVIDELRKEDTSIS-NSIADHIESFVDY--DFAHLLFSDGNVTQS-ISL-EKQ-LNIIQVADLVLPDADTSFEEY----------TTMELLSVAMLIVISTFALDFIHTDRS-IFK-IVDLD-EAWSFLQVAQG--------KTLSMKLVRAGRAMNAGVYF-VTQNADDLLDE--KMKNNIGLKFAFRSTDL-VE------IKKTLTFFGVDPEDENNQKRLRE-LENGQCLISDLYGRVGVMQFHPIFEELLQAFDTRPPIRNEVE---- |
| 1QBK Chain:B ((3-889)) | YEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDRPLNIMIPKFLQFFKHSSP-KIRSHAVACVNQFIISRTQALMLHIDSFTENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDEDDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTY----LKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAF--------SKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPKDDLRDMF---CKILHGFKNQVGDENWRRFSDQF------PLPLKERLAAFYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4440 for 6129 contacts (0.7/contact) +
2D Compatibility (PS) -79921 + (NN) 2868 + (LL) 1040
1D Compatibility (HY) -5200 + (ID) 4250
Total energy: -81023.0 ( -13.22 by residue)
QMean score : 0.108
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