Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------MTDKIFQEKVGPVALTIVPTQKYKSNKIVFKFRAPLERETVTKRALLSILLETNSEKYPTQTDFRKQLANLYGANFYTTTAKKGNEHVLTVIFDMIDGQYVSDGNHILEDAFAFMEQALFRPNVANDAFNEETLTREKENLKSSLEG-IYDDKIRF--ASKRLVEEMFRDDEFRFGSAGVLEDIDAITAKDLYEYYLQFIAE----DTIEIFICGDVTKEEVMPLIEKMAFS------PRPERKGIFYTKEAPKEVRVIHEQQAINQGKLVLGYQTETLFGDDDFVALQLANGLLGGFANSKIFINVREKASLAYYASSRIDSFKGYMIISAGID-----EVNYEQALKIIEEQVVAMKQGNFTDDELNQTKEMLINQL-LETNDQAQGLIELVYNNVLRDANLDLENWIAKIKQATKEEVVAAINKIKPDTIYFLSKGGEELHGKNHI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 2JBU Chain:A ((15-987)) | NPAIKRIGNHITKSPEDKREYRGLELANGIKVLLISDP--TTDKSSAALDV----------HIGSLSDPPNIAGLS--HFCQHMLFLGTKKYPKENEYSQFLSE-HAGSSNAFTSGEHTNYYFDVS------------HEHLEGALDRFAQFFLCPL-----FDESCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSAYYSSNLMAVCVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPEHPFQEEHLKQLYKIVPIK--DIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQKEGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLPTKNEFIPTNFEILPLEKEATPYPALIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVEAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNFDRDNTEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JBU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120031 for 3122 contacts (-38.4/contact) +
2D Compatibility (PS) -42923 + (NN) -24186 + (LL) 2096
1D Compatibility (HY) -10400 + (ID) 2700
Total energy: -198144.0 ( -63.47 by residue)
QMean score : 0.415
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