Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKYVVIGNPIRHSLSPAMQNRIF----QELGMNAEYNSVLIEEDAFETEIK-KLMDSGVRGFNITTPFKERILPFLDELDNLAAASGAVNTVLKKEDKWYGFNTDGKGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKDNNNHHAITLEEAEKQLADFTIIIQTTSIGLEASKNKSPISLANVKQGTICSDIIYNPAETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN |
| 3PHJ Chain:B ((3-247)) | LKSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILL---PLESHIKSEFLHLGLSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLENDELVGYNTDALGFYLSLK-------YQNALILGAGGSAKALACELKKQ-GLQVSVLNRSSRGLDFFQRLGCD----CFMEPPK--SAFDLIINATS---ELPLNKEVLK-GYFKEGKLAYDLAYG-FLTPFLSLAKELKTPFQDGKDMLIYQAALSFEKFSA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59441 for 1993 contacts (-29.8/contact) +
2D Compatibility (PS) -24831 + (NN) -6712 + (LL) 3244
1D Compatibility (HY) -19600 + (ID) 4050
Total energy: -111390.0 ( -55.89 by residue)
QMean score : 0.418
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