Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIGIIGAMEEEVELLKNSMSSVEEIVIGGAKFYIGEIASKEVVLLESGIGKVNAALGTTLMADRFKPEVIINTGSAGGMAEGLAVGDVIISDRLAYGDVDVTEFGYTYGQVPRMPAFYQGDAVLLKKAETIYREYFATSENKAVYGLVVTNDSFIMRPDQHEIIRTFFPDVKAVEMEAAAIAQVAYQFDIPFLIIRAISDLANQEATISFDEFIHLAAKQSATCIIELLKTI
4QEZ Chain:B ((2-226))
-RIAVIGAMEEEVRILRDKLEQAETETVAGCEFTKGQLAGHEVILLKSGIGKVNAAMSTTILLERYKPEKVINTGSAGGFHHSLNVGDVVISTEVRHHDVDVTAFNYEYGQVPGMPPGFKADEALVALAEKCMQ--------QVVKGMIATGDSFMSDPNRVAAIRDKFENLYAVEMEAAAVAQVCHQYEVPFVIIRALSDIAGKESNVSFDQFLDQAALHSTNFIVKV----
General information:
TITO was launched using:
RESULT:
Template:
4QEZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149254 for 1938 contacts (-77.0/contact) +
2D Compatibility (PS) -23912 + (NN) -12594 + (LL) 1224
1D Compatibility (HY) -21600 + (ID) 5350
Total energy: -211486.0 ( -109.13 by residue)
QMean score : 0.645
(partial model without unconserved sides chains):
PDB file :
Tito_4QEZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QEZ-query.scw
PDB file :
Tito_Scwrl_4QEZ.pdb
: