Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFGFGNKDIGIDLGTANTLVYMKGKGIVL---------REPSVVAMKKDTQEIV---AVGSDAKNMIGRTPGNIV--------------------------------------AIRPMKDGVIADYDTTAAMMKYYIQKAGKSVNASKPRVMICVPSGITGVEKRAVIDATRQAGAKDAFTIEEPFAAAIGAGLP-VGEPTGSMVVDIGGGTTEVAVISLGG-------IVTSRSVRTAGDDLDEVIINYIRKKYNLLIG-------------DRTAEAIKMEIGSASPKGLDLSPFSIRGRDLVT----GLPKTIEITPEEISEALADTV-AAIIDAVKGTLENTPPELSADIMDKGIVLTGGGALLRNLDTVISEE--TKMPVIIADEPLDCVAIGTGKALENM-DMYKRKKMN |
| 1DKG Chain:D ((3-383)) | ------KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD-----GETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK-TGNRTIAVYDLGGGTFDISIIEIDEKTFEVLA--TNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSS-------AQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN-RSIELLKVALQDAG--LSVSDID-DVILVGGQTRMPMVQKKVAEFFG--KEPRKDVNPDEAVAIGAAVQGGVLT--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140883 for 2447 contacts (-57.6/contact) +
2D Compatibility (PS) -31994 + (NN) -13445 + (LL) 2580
1D Compatibility (HY) -7200 + (ID) 4050
Total energy: -194992.0 ( -79.69 by residue)
QMean score : 0.407
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