Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEELLKRFTKYVKVDTQSNEESTVCPTTPGQMELANILVTELKEIGMQEVTVDEFGYVMATLPSNSTKEVPVIGFLAHLDTATDLTGKNVQPQVHENYDGKDIILNKDLNVVLSPKQFPELAGYKGKTLITTDGTTLLGADDKAGITEIMVAMNHLINHPEIKHGKIRIAFTPDEEIGRGPERFDVEAF--GAKYAYTMDGGP---LG----ELEYESFNAASAKITFKGNSVHPGTAKNKMVNAVKMAMEFDARIPKDEAPEYTEGYEGFYHLISLNGDVEQARSYYIIRDFDHLKFVERKTHIASIAKELEEKYGEGSVELKLND-QYYNMREKIEPVKEIVDIVSAAMRN-LDIEPKI--SPIRGGTDGAQLSYKGLPT--PNIFGGG-----ENFHGKFEYVALESMVKATEVIIEVARLFEEKE |
| 1XMB Chain:A ((48-425)) | -FDWMVKIRRKIHENPELGYEE----------LETSKLIRSELELIGIKYRYPVAITGVIGYIG-T--GEPPFVALRADMDALPIQEGVEW---EHKSK---------------------------IAGKMHACG-----H--DGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGK----------TIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVN--PDSITIGGTLRAFTGFT--QLQQRVKEVITKQAAVHR-CNASVNLTPNGREPMP-PTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAE-TIPGHFSLLGMQDETNGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49955 for 2913 contacts (-17.1/contact) +
2D Compatibility (PS) -36766 + (NN) -15927 + (LL) 2376
1D Compatibility (HY) -3600 + (ID) 2450
Total energy: -106322.0 ( -36.50 by residue)
QMean score : 0.443
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