Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNNREKLLALFTESDGTYLSGQEIADSLGCSRTAVWKQMEALRKEGFEIEAVRNRGYRLSATAEQYTKDALLLGLETKFIGQHLEVHESVNSTQIIAHQQIETSPEGTVIVADEQTAGKGRLLRPWSSKKGEGIWMSVILKPQIPIQKVPQFTFIASLAITEAIENITKLEPKIKWPNDIYIGKRKICGVLTEMQAEAETIHAVIIGMGINVNQQEFPEEIKDKASSLKLELGESVSRKALLQEILTSLEKYYELFLDKGFAPIKLLWETKAIPFGEKLTASTTKGKIHGQVKGISDEGVLLLQDTLGEVHSIYSADILLDNEK |
| 1WNL Chain:A ((1-235)) | ------------------------------------------------------------------------MLGLKTSIIGRRVIYFQEITSTNEFAKTS--YLEEGTVIVADKQTMGHGRLNRKWESPEG-GLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKE-FSIDGRIKWPNDVLVNYKKIAGVLVEGKGD-----KIVLGIGLNVN-----NKVPNGATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILN--LVRDNMILGVRVKILG-DGSFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSLRFL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129679 for 1946 contacts (-66.6/contact) +
2D Compatibility (PS) -25072 + (NN) -10811 + (LL) 7392
1D Compatibility (HY) -25200 + (ID) 3900
Total energy: -187270.0 ( -96.23 by residue)
QMean score : 0.517
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