Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNFLYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEAGGKRIRP-MFVCLSARLAANADFNAVKN----ASVAIELIHMASIVHDDV--VDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVEL-----STGEIE-----QLKDKYNFDQSVRNYLRRI----KRKTALLIAASCGLGGVVSG-QSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAMEDPFLKKRISQITEETPAEEIAVLVEEVKKTGAKQAEDVATTYLKKAVEILDSLPQVPELKPLKQIVRVLDKRNY |
3Q1O Chain:D ((54-256)) | -------------------------------------------GGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNAL------LESHIIVELIKILSANGGIKGMILGQALDCY-FENTPLN-LEQLTFLHEHKTAKLISASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLD----------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47922 for 1214 contacts (-39.5/contact) +
2D Compatibility (PS) -18853 + (NN) -7729 + (LL) 12128
1D Compatibility (HY) -13200 + (ID) 3400
Total energy: -78976.0 ( -65.05 by residue)
QMean score : 0.358
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