Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSILMNQAIQAFLLEDIGQYDLSAGTVFPRDTMGEGVFLAKETGILCGISIPPKVYELLGGNIQFEAYKKDGDWVQ--KGD----IIAAVKAPVRTLLSGERVILNLMQRMSGIASQTNFAIKQLDDSAIR--ICDTRKTAPGLRAFDKYAVQTGGGFNHRNGLYDGVMLKDNHIAFSGGITSAVSTVRGKLGHMVKIEVETETAEQVKEAVQAGADIIMFDNRTPEEIKQLVKLVPPHITTEISGNVTLENIHRYKGSGANYISLGSLTHSVRAFDISFNSKGGIKA |
| 3C2R Chain:B ((16-291)) | -------QDVTNWLSEDVPSFDF-GGYVVGSD-LKEANLYCKQDGMLCGVPFAQEVFNQC--ELQVEWLFKEGSFLEPSKNDSGKIVVAKITGPAKNILLAERTALNILSRSSGIATASHKIISLARSTGYKGTIAGTRKTTPGLRRLEKYSMLVGGCDTHRYDLSSMVMLKDNHIWATGSITNAVKNARAVCGFAVKIEVECLSEDEATEAIEAGADVIMLDN---------------HFLLECSGGLNL------LCDDIDIYSTSSIHQGTPVIDFSL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C2R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133091 for 1889 contacts (-70.5/contact) +
2D Compatibility (PS) -26329 + (NN) -6983 + (LL) 1904
1D Compatibility (HY) -19200 + (ID) 4500
Total energy: -188199.0 ( -99.63 by residue)
QMean score : 0.338
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