Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLSHHVCPECGQYDGKDVANS
4IO9 Chain:Z ((6-57))
--VPKKKTSKSKRDMRRSHHALTAPNLTECPQCHGKKLSHHICPNCGYYDGRQV---
General information:
TITO was launched using:
RESULT:
Template:
4IO9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6335 for 238 contacts (26.6/contact) +
2D Compatibility (PS) -5567 + (NN) -3526 + (LL) 388
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: -6470.0 ( -27.18 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_4IO9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IO9-query.scw
PDB file :
Tito_Scwrl_4IO9.pdb
: