Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKYQLVIVGYGGMGS-YHVTLASAADNLEVHGVFDILEEKREAAAEKGLKIYESFEAVLADEKVDAVLIATPNDSHKELAITALEAGKHVVCEKPVTMTSEDLLAIMDVAKKVNKHFMVHQNRRWDEDFLIIKEIFEQKTIGEMFHLESRVHGANG-IPGDWRHLKAHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFAL-GDEVDDGFVTFITFEN---GITAQIEVGTTNFIKLPRWYVKGTEGTGIIHDWDLSGEIVQPTALAKTSEPTPIKAGQGLTKTMAPPSEEATNTLSLPAPAKLAPSFYNNFIDVLNNTSEPIVQNEEVYQVLKLIEAIFEAAETNRTIHSI |
3FHL Chain:A ((3-353)) | LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKE-RYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDILAKSLLGRLVEYESTFARYRNF-------------GLTYNLGSHLIDQAIQLFG-MPEAVFADLGILREGGKVDDYFIIHLLHPSLAPNVKITLKASYLMREAEPRFALHGTLGSYVKYGV----------------PNWGEESEQEWGLLHTE-INGKEICRKYPGIAGNYGGFYQNIYEHLCLGQPLETHAQDILNVIRIIEAAYQSHRENKIVNL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179052 for 2596 contacts (-69.0/contact) +
2D Compatibility (PS) -33669 + (NN) -12080 + (LL) 1364
1D Compatibility (HY) -15200 + (ID) 3900
Total energy: -242537.0 ( -93.43 by residue)
QMean score : 0.513
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