Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTKTLQDRMILPGNGTIPYIGLGVFQVTEQEFIAGAVEKAIEVGYRLFDTAAVYNNEAIVGQAIASS----AVSREELFISSKVWNGDLGYDETLFAFERTLRNLKLDYLDLYLIHWP------------------VAGK--YRDSWRAMERLHDEKLIKSIGVANFKQHHLSDLL--VAANEKPVLNQVETHPLLPQNDLRKYLVEQNIAHAAWSPLAKG----------ILMQNPVITEIAKKHQASVDQVILQWHLNRNTIIFPKSITSSRIEENSRLSYFQLDASDMEKIDRLETGKRVGPDPDDLEYFLSSIERERAYLASENEE |
| 4GA8 Chain:A ((7-289)) | ----------LSTKAKMPIVGLGTWKSPLGK-VKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATI------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134597 for 2091 contacts (-64.4/contact) +
2D Compatibility (PS) -25930 + (NN) -6273 + (LL) 3064
1D Compatibility (HY) -24000 + (ID) 5550
Total energy: -193286.0 ( -92.44 by residue)
QMean score : 0.475
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