Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTKKPEINTILQVTPDPHSLPAAMATEDLHVYYGDNH-AIKGVDLTFPENKVTALIGPSGCGKSTYLRALNRMNDEIDGCRMEGQILYDGININRKEVDLYNVRKEIGMVFQKPNPFTKSIYENVAFGLKRHGMKNKKEIMERVEKSLRRAALWDEV-------KDDLGKSALSLSGGQQQRLCIARAVAMQPKVLLLDEPASALDPISTSKIEDLINELKNKYTIIIVTHNMQQAARVSDYTSFFYLGEVVEFSGTSELFTNPQEKQTEDYISGNFG |
3NHA Chain:A ((57-249)) | ---------------------------ENVHFSYAD-RETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGC-----IRIDGQDIS--QVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGN-------DEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRL--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NHA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95937 for 1349 contacts (-71.1/contact) +
2D Compatibility (PS) -19565 + (NN) -1809 + (LL) 5356
1D Compatibility (HY) -10800 + (ID) 3350
Total energy: -126105.0 ( -93.48 by residue)
QMean score : 0.475
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