Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPFVTIQFLEGRTDDQKKALVSEVTEVVSKNLKAPKENIHVILEEMKKTDYGVGGVRKSDI
1BJP Chain:C ((1-54))
-PIAQIHILEGRSDEQKETLIREVSEAISRSLDAPLTSVRVIITEMAKGHFGIGG------
General information:
TITO was launched using:
RESULT:
Template:
1BJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13163 for 282 contacts (-46.7/contact) +
2D Compatibility (PS) -6085 + (NN) -3706 + (LL) 664
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -29140.0 ( -103.33 by residue)
QMean score : 0.699
(partial model without unconserved sides chains):
PDB file :
Tito_1BJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BJP-query.scw
PDB file :
Tito_Scwrl_1BJP.pdb
: