Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MKLKKVAMGITVVMASSLLLVGCGSSD-DSSKDKKSTDTKQTETKKTAKTDG----------TMTDGTYKLEEKNFDDKGWKGFMSIEVKDGKITKANYD----YKNKDGKLKSEDADYEKAMKDKVGTGPQEYLKQLSDSLVKNQSAASVEVVSGATHSSDAFINYANQLIQAAQKADTTTISINNLAKMEDGTYKLEEQNYAHGYRVVFSMDVKDGKITKSDYNYVDKDGKLKSDDADYEKNMKAKSGTGPKEYIPALNK-SLVEKQDVAA--VDTVSGATNSSNQFKIYAAQLQNAAQNGNTDTIKVY--NLVEAE |
| 2XBG Chain:A ((38-345)) | AIPALDYNPWEAIQLPTTATILDMSFIDRHHGWLVGVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDS-----GKNWQALVQEAIGV-----MRNLNRS----PSGEYVAVSS----RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR---------------LWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVTDLTAA- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2XBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 96647 for 1906 contacts (50.7/contact) +
2D Compatibility (PS) -27582 + (NN) 183 + (LL) 2172
1D Compatibility (HY) -3600 + (ID) 2600
Total energy: 65220.0 ( 34.22 by residue)
QMean score : 0.118
|
|
|