Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANLSELPNIGKVLEQDLIKAGIKTPAELKDVGSKEAFLRIWENDSSVCLSELCALEGAVQGI--RWHDLDEAKKSELKKFHQSL
2A3D Chain:A ((1-73))
MGSWAEFKQRLAAIKTRLQALG-----------GSEAELAAFEKEIAAFESELQAYKGKGNPEVEALRKEAAAIRDELQAYRHN-
General information:
TITO was launched using:
RESULT:
Template:
2A3D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3853 for 409 contacts (-9.4/contact) +
2D Compatibility (PS) -7163 + (NN) 1085 + (LL) 788
1D Compatibility (HY) -800 + (ID) 800
Total energy: -10743.0 ( -26.27 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_2A3D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A3D-query.scw
PDB file :
Tito_Scwrl_2A3D.pdb
: