Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VERVYNFSAGPAVLPVPVLEKVQRELLSYNGSGMSVMELSHRSELFQNILDDAESLIRELMEIPDNYKVLFLQGGASLQFDMVPMNLAN--G-KKAAYVNTGSWAKKAISEAKKIQGVEVEVIASSEDRNFSYIPEIP--TVSSDVAYLHVTTNNTIEGTAMFDVPD--SAVPVVADMSSNILSSVYDVKKFGLIYAGAQKNIGPAGLTLVIVREDLIGQVE-GLPSMLDFKVQAENDSMYNTPPTFAIYVAKLVFEWIKEQGGVAGIEALNRKKAALLYDYIDQS-DFFSSPV-EPSARSLTNVPFVTNSA-EF--D-KAFVKEAEANGFENLKGHRSVGGMRASLYNAFPIEGVEALIAFMEKFANARKGGEVRV |
| 3E77 Chain:A ((21-376)) | ----------QSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINI-VH-PKL-GSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF-IPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGF-YVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMHQ------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3E77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -176584 for 2926 contacts (-60.3/contact) +
2D Compatibility (PS) -37443 + (NN) -20846 + (LL) 1416
1D Compatibility (HY) -33200 + (ID) 8200
Total energy: -274857.0 ( -93.94 by residue)
QMean score : 0.572
|
|
|