Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTENEQLFWNRVLELSRSQIAPAAYEFFVLEARLLKIEHQTAVITLDNIEMKKLFWEQNLGPVILTAGFEIFNAEITANYVSNDLHLQETSFSNYQQSSNEVNTLPIRKIDSNLKEKYTFANFVQGDENRWAVSASIAVADSP-------GTTYNPLFIWGGPGLGKTHLLNAIGNQVLRDNPNARVLYITAENFINEFVSHIRLDSMEELKEKF--RNLDLLLIDDIQSLAKKTLG----GTQEEFFNTFNALHTNDKQIVLTSDRNPNQLNDLEERLVT--RFSWGLPVNITPPDFETRVAILTNKIQEYPYDFPQDTIEYLAGEFDSNV-RELEGALKNISLVADFKH-AKTITVDIAAEAIRARKNDGPIVTVIPIEEIQIQVGKFYGVTVKEIKATKRTQDIVLARQVAMYLAREMTDNSLPKIGKEFGGRDHSTVLHAYNKIKNMVAQDDNLRIEIETIKNKIR |
| 2CE7 Chain:A ((11-255)) | -------------------------------------------------------------------------------------------------------------------KRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEA-----NVPFFHISGSDFVELFVGVGAA-RVRDLFAQAKAHAPCIVFIDEIDAVGRH---DEREQTLNQLLVEMDGFDSKEGIIVMAATNRPDI---LDPALLRPGRFDK--KIVVDPPDMLGRKKILEIHTRNKPL-AEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDK-ITMKDFEEAIDRVILISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105002 for 1777 contacts (-59.1/contact) +
2D Compatibility (PS) -23417 + (NN) -10899 + (LL) 9656
1D Compatibility (HY) -14000 + (ID) 2450
Total energy: -146112.0 ( -82.22 by residue)
QMean score : 0.497
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