Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADYAGK------NPL-LVGVLKGSVPFMAELLKHI---DTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
1P18 Chain:A ((9-191))
------EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLRGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGLTSSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVYA-
General information:
TITO was launched using:
RESULT:
Template:
1P18.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120009 for 1321 contacts (-90.8/contact) +
2D Compatibility (PS) -19251 + (NN) -8155 + (LL) 600
1D Compatibility (HY) -20800 + (ID) 4000
Total energy: -171615.0 ( -129.91 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_1P18.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P18-query.scw
PDB file :
Tito_Scwrl_1P18.pdb
: