Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDFEELFDKVK-PIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQKRQFNKMPYEEISEVSHYVKSKGLVLDDYIAYRDTLTKVEETLSDIDKEKFEKLISGERFAGKKQFIRDIQPFFNAFKAD
2L6O Chain:A ((1-114))
MGAGQTPHPQLIWPALLKQQGCNELLPLRTNDDWQRFCADSKHLLQYGDKLVDSNFHCFVLEED------AHWHPAAPLPPEGLNDLIRAHCATLGHCCTSK--------MHLHSVMDAIDFLNALEG--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2L6O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32040 for 769 contacts (-41.7/contact) +
2D Compatibility (PS) -11513 + (NN) 2816 + (LL) 3212
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -40675.0 ( -52.89 by residue)
QMean score : 0.227
(partial model without unconserved sides chains):
PDB file :
Tito_2L6O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L6O-query.scw
PDB file :
Tito_Scwrl_2L6O.pdb
: