Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTYFDNFLKTNQAYADLHGTAHLPIKPKTKVAIVTCMDSRLHVAQALGLDLGDAHILRNAGGRVTDDVLRSLVISQQQLGTREIVVLHHTDCGAQTFTNEAFATQLQRDLGVDMHGHDFLPFNDIEESVREDVAKLHASPLIPNDVVISGAIYDVDTGRMVEVK
3LAS Chain:A ((2-166))
VMSYFDNFIKANQAYVDLHGTAHLPLKPKTRVAIVTCMDSRLHVAPALGLALGDAHILRNAGGRVTDDVIRSLVISEQQLGTSEIVVLHHTDCGAQTFTNAEFTEQLKRDLAVDAGDQDFLPFTDIEESVREDIALLKNSPLIPEDIIISGAIYDVDTGRVREVN
General information:
TITO was launched using:
RESULT:
Template:
3LAS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98070 for 1140 contacts (-86.0/contact) +
2D Compatibility (PS) -18083 + (NN) -9945 + (LL) 0
1D Compatibility (HY) -21200 + (ID) 6550
Total energy: -153848.0 ( -134.95 by residue)
QMean score : 0.653
(partial model without unconserved sides chains):
PDB file :
Tito_3LAS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LAS-query.scw
PDB file :
Tito_Scwrl_3LAS.pdb
: