Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKEKLILAYSGGLDTSVAIAWLKK--DYDVIAVCMDVGEGKDLDFIHDKALTIGAIE-SYILDVKDEFAEHFVLPALQAHAMYEQKYPLVSALSRPIIAQKLVEMAHQTGATTIAHGCTGKGNDQVRFEVAIAALDPELKVIAPVREWKW-HREEEITFAKANGVPIPADLDNPYSIDQNLWGRANECGVLENPWNQAPEEAFGITKSPEEAPDCAEYIDITFQNGKPIAINNQEMTLADLILSLNEIAGKHGIGRIDHVENRLVGIKSREIYECPAAMVLLAAHKEIEDLTLVREVSHFKPILENELSNLIYNALWFSPATKAIIAYVKETQKVVNGTTKVKLYKGSAKVVARHSSNSLYDENLATYTAADNFDQDAAVGFIKLWGLPTQVNAQVNKG
1KOR Chain:A ((1-395))---MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGA-SKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVP-----PYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAALLQRLNEIGGRHGVGRVDIVENRFVGMKSRGVYETPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFWYAPEREALQAYFDHVARSVTGVARLKLYKGNVYVVGRKAPKSLYR----------GYDQKDAEGFIKIQALRLRVRALVER-


General information:
TITO was launched using:
RESULT:

Template: 1KOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -188339 for 3102 contacts (-60.7/contact) +
2D Compatibility (PS) -40718 + (NN) -20086 + (LL) 972
1D Compatibility (HY) -35200 + (ID) 8850
Total energy: -292221.0 ( -94.20 by residue)
QMean score : 0.503

(partial model without unconserved sides chains):
PDB file : Tito_1KOR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KOR-query.scw
PDB file : Tito_Scwrl_1KOR.pdb: