Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MLFSEIFKFC-------ISILWYFILTKNKGVVVMR---AWKGIVLILSSIVVTLVAWQNAGLSEFVVPGLALTSLSLTFLLSTKFRILESYFQGIENMYFYHKVMAVFSMILLLLHKIGLGQGGHGSEFAKTIGSAGLY---LFLSIVFVAYFGNFLKYEI---WR-------------FIHRFVYLV--------YILGLVHTFLILGDRIL------------GNTLLSLIVLG--YAVIGVI--------------------------SGFYIIFLYSRMR----FRRVGYVQKVTHLNHDTTEIEIAMKR--------PYRYDYGQFTFLKIYQAGFESAAH------------PFSISGGHDRVIFLTVKASGDYTKSIYKQLKVGTKIALDRAYGHMLFDKDKKEQVWIAGGI-GITPFISFIRENSILTKRVDFFYTFSNQDNLIYQDMLESYAKANPNFKLHLNNSSLQGRLDFSQSVFEGQPTIFMCGPTSMTSTYAKVFRQKDAKSRLVYEGFSFRDSWLSIFLLKTFDKVYSNLIK------------------------------------------- |
| 3J5P Chain:A ((1-564)) | LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAML-NLHNGQNDTIALLL--DVARKTDSLKQFVNASYT--DSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPLNRLLQDKWDRFVKRIFYFNFFVYCLYMIIFTAAAYYRPVEGLPPYKLKNTVGDYFRVTGEILSVSGGVYFFFRGIQYFLQRRPSVDSYSEILFFVQSLFMLVSVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIEDG------KYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256990 for 2999 contacts (-85.7/contact) +
2D Compatibility (PS) -43665 + (NN) 1015 + (LL) 1136
1D Compatibility (HY) -23600 + (ID) 4150
Total energy: -326254.0 ( -108.79 by residue)
QMean score : 0.221
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