Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKESFKLIATAAAGLEAIVGREIRNLGIDCQVENGRVRFHGDIKTIIETNLWLRAADRIKIIVGEFPARTFEELFQGVYGLDWENYLPLGAKFPIAKAKCVKSKLHNEPSVQAISKKAVAKKLQKVFHRPEGVPLQENGAEFKIEVSILKDKATVMIDTTGSSLFKRGYRAEKGGAPIKENMAAAIIQLSNWFPDKP--LIDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEAWPWVDQSQVQKVRDEAESKANYDIDLDISGFDLDGRMVEIARKNAEEAGLGDVIKLKQMRLQDLKTDKINGVIISNPPYGERLLDDKAVDILYNEMGQTFAPLKTWSKFILTSDEGFEKKYGSQADKKRKLY--NGTLKVDLYQYYGERVRRQVK------------------------ |
| 1T43 Chain:A ((2-275)) | --EYQHWLREAISQLQAS----------------------------------------------ESPRRDAEILLEHVTGRGRTFILA--------------------FGETQLTDEQCQQLDALLTRRRDGEP-----------IAHLTGVRE---------FWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPD--------------------------------------CEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFA-MIVSNPPY-----------IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28843 for 1937 contacts (-14.9/contact) +
2D Compatibility (PS) -26414 + (NN) -12441 + (LL) 9372
1D Compatibility (HY) -2800 + (ID) 2300
Total energy: -63426.0 ( -32.74 by residue)
QMean score : 0.330
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