Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEIAVLIIAIAFVVLVLGILFVLKKVSETIEETKQTIKVLTSDVNVTLYQTNEILAKANVLVDDVNGKVSTIDPLFVAIADLSESVSDLNLQARHIGQKASSATSSVTKAGSALAIGKAASKIFRKKGDKK
2HJQ Chain:A ((1-111))
MFTAKLIK---GKTYNVMGITFR-AGVSQTVP--KKLYEYLNENPYFILTQELN-----NQKDDPINYTESELKGM---------NKAEHESIISNLGRNPSDFKNADERIAYILKQIDNKGELEHHHHHH-
General information:
TITO was launched using:
RESULT:
Template:
2HJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34247 for 663 contacts (-51.7/contact) +
2D Compatibility (PS) -11610 + (NN) 2337 + (LL) 2672
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -42998.0 ( -64.85 by residue)
QMean score : 0.420
(partial model without unconserved sides chains):
PDB file :
Tito_2HJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HJQ-query.scw
PDB file :
Tito_Scwrl_2HJQ.pdb
: