Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIEKTNRMNALFEFYAALLTDKQMNYIELYYADDY------SLAEIAEESGVSRQAVYDNIKRTEKILE-AYEMKLHMYSDYIVRSQIFDDILEKY----TDDAFLQEKISILSSIDNRD------
2AO9 Chain:A ((13-132))
--------MMAKLDELKQKLTAKQIQAAYLLVENELMEEEKRTQDEMANELGINRTTLWEWRTKNQDFIAFKSEVADSFLAEK--REQVYSKLMQLILGPQPSVKAMQLYMQRFGLLTDKKVIEGDL
General information:
TITO was launched using:
RESULT:
Template:
2AO9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29627 for 568 contacts (-52.2/contact) +
2D Compatibility (PS) -10958 + (NN) -5111 + (LL) 1152
1D Compatibility (HY) -6000 + (ID) 800
Total energy: -51344.0 ( -90.39 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_2AO9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AO9-query.scw
PDB file :
Tito_Scwrl_2AO9.pdb
: