Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISRKVALVTGASAGFGAAIVTKLVSDGYSVIGCARRMDKLKCFGEKFS----EGYFYPLQMDITSRESVDKALESLPKNLQSIDLLVNNAGLALGLDKSYEADFEDWMTMINTNVVGLIYLTRCILPKMVEVNRGLIINLGSTAGTIPYPGANVYGASKAFVKQFSLNLRADLAGTKIRVTNLEPGLCEGTEFSTVRFKGDHKRVEKLYEGAHAIQAEDIANTVSWVASQPEHININRIEIMPVSQTYGPQPVYRD
4BO6 Chain:B ((28-249))
----KVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGA--GLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGIT-----------DEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVV-----AGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFID-TDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYMS-------
General information:
TITO was launched using:
RESULT:
Template:
4BO6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150372 for 1641 contacts (-91.6/contact) +
2D Compatibility (PS) -20940 + (NN) -1801 + (LL) 1564
1D Compatibility (HY) -12000 + (ID) 3500
Total energy: -187049.0 ( -113.98 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_4BO6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BO6-query.scw
PDB file :
Tito_Scwrl_4BO6.pdb
: