Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVMKIIELKEATVQVSNGLAEMKTILDHVNLSIYEHDFITILGGNGAGKSTLFNVIAGTLMLSGGNIYIMGQDVTNL-------------PAEKRAKYLSRVFQDPKMGTAPRMTVAENLLVAKFRGEKRPLVPRKITNYTEEFQKLIARTGNGLDRHL-ETPTGLLSGGQRQALSLLMATLKKPNLLLLDEHTAALDPRTSVSLMGLTDEFIKQDSLTALMITHHMEDALKYGNRILVMKDGKIVRDLNQAQKNKMAIADYYQLFD |
1B0U Chain:A ((5-245)) | ---NKLHVIDLHKR---Y--GGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNL--WSHMTVLENVMEAPIQVLG-----LSKHDARERALKYLAKV--GIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAE-EGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE--GDPEQVFGNPQSPRLQQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -129607 for 1842 contacts (-70.4/contact) +
2D Compatibility (PS) -24366 + (NN) -7029 + (LL) 1044
1D Compatibility (HY) -11600 + (ID) 2950
Total energy: -174508.0 ( -94.74 by residue)
QMean score : 0.446
|
|
|