Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKHQSRCKPDSPKKLMELNMTKKIFLFICATLLVGIALYTPTTSIFNHNNVYAATKKAKIKFNKTQKKIVKKAREYAKSGHMSKDSIIEKLKKDSKKYRQEDINFVINNLKVDYKKNALISAKIYSKTMNLSKQSIFEQLYSESPDKATHSDKFTKEESQYAIDHLK-VDFKENALETAKSYQSS---SSLSKEEIYKQLTSTLGDKFTNDEAQYAVDHLK |
| 3C1D Chain:A ((12-112)) | --------------------------------------------------------------------------------------------------------------------ARLLDRAVRILAVRDHSEQELRRKLAAP----------ATAEDYERVIAWCHEHGYLDDS-RFVARFIASRSRKGYGPARIRQELNQ---KGISREATEKAMREAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10897 for 546 contacts (20.0/contact) +
2D Compatibility (PS) -9256 + (NN) -1793 + (LL) 8832
1D Compatibility (HY) -800 + (ID) 600
Total energy: 7280.0 ( 13.33 by residue)
QMean score : 0.572
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