Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKNLNLLMKPKTSSKQKKEKTKKREVLPTTLNTLAYQGLFPNGLMQVSPDYFSQSYLLGDVNYQTVGLEEKEAIVEKYSNLINSLDDKTNFQLTIFNKKVNLEQFRKSVLYPLQEDGFDSYREELNRMMDSNLEAGENNFSAVKLISFGKSDQAPKLAYRSLSQIGEYFKSGLSEIEASFTLLTGEERVNNLADMLRGENHLPFT--YKDLVLSG----QTTKHFIAPTSISFKHKNHIEIDNRLLQIVYVRDYGMELGDKFIRELMQSDLEVVISLHAKGSTKSEAMKKLRTKKTLMESQKIGEQQKMARSGIYLDKVGHALESNIDEAEDLLKTMTQTGDKLFDTVFLIGFFADN--------EEQLKQSLDIIKQVAGSNDLIIDNLTYMQEAALNSLLPFGKNCLEGVSRSLLTSNIAVNSPWTSVDLQDAGGKFYGINQISSNIITIDRGKLNTPSGLILGTSGSGKGMATKHEIISTKLKEADKDTEIIIVD--PENEYSVSGQAFGGEIIDIAPDSRTFLNVLDLSDDNLDEDPVKVKSEFLLSWIGKLLDRKMDGREKSIIDRVTRLTYKHFEEPSLVEWVFV--LSQQPEQEAR----DLALDMELYVEGSLDIFSHKTTIQTDSHFLIYNVKK------LGDELKQIALMVIFDQIWNRVVKNQKLGKKTWIYFDEMQLLLLDQFASDFFFKLWSRVRKYGATPTGITQNVETLLLDANGRRIIANSEFMILLKQAKSDREELVHMLGLSKELEKYLVNPEKGAGLIKAGSTVVPFRNKIPHQTKLFDIMSTDPDKMRT |
| 3K30 Chain:A ((7-690)) | VAAPYDVLFEPV-------------QIGPFTTKNRFYQVPHCNGM----------------------GYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWD------DQDLPALKRIADAIHEGG--GLAGIELAHNGMN--APNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRM---------------RLLRELLEDTLDEC-----------------------------AGRAAVACRITVEEEIDGGI--TREDIEGVLRELGELPD-LWDFA--MGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFT--SPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRD--------GRLNLIRECIGCNICVSGDLTMSPIRCTQNPSM---GEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQES--------ALPGLSAWGRVKEYREAVLAELPNVEIYRESPMTGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAGRLP--DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPREELYLDLVARRDAGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLPSNDEVPFRREVTQLA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8164 for 5882 contacts (-1.4/contact) +
2D Compatibility (PS) -68060 + (NN) -320 + (LL) 7424
1D Compatibility (HY) -6800 + (ID) 4500
Total energy: -80420.0 ( -13.67 by residue)
QMean score : 0.199
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