Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKEILVLGAGYAGLKAVRNLQKQSGDFHITLV-DMNDYHYEATELHEVAAGSQPKEKITFPIKDVINTNKVNFMQDEVLKVDAENKTVTVKNNGELHYDYVVVALGFVSETFGI-KGAMENALQMTNISQAENIHNHIVNTMKLYRETKDENLLKLLVCGAGFTGIELAGAMVDERPKYAALAGVKPEQIEIICVEAATRILP-MFDDELAQYGVNLIKDLGINLMLGSMIKEIKPGEVVYGTSKEDEELKSITAGTIIWTTGVS-GSPVMGESGFDQRRGRVMVNSDLRDPKYDNVYVIGDVSAFMDTESGRPF-PTTAQIATRMGAHVAKNLL-HQIKGEATEDFSYSPQG--TVASVGNTHGLGVVGKTKIKKYPASVMKKIIMNKSLV---------DMGGLKELLAKGRFDLYH--------------- |
| 1D7Y Chain:A ((5-405)) | ALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLL--GVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGL------------RPQSRLLIVGGGVIGLELAATARTAG-------------VHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGT------RIAADMVVVGIGVLANDALARAAGLACDDG-IFVDAYGR-TTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAPGYAELPWYWSDQGALRIQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATCVNNARDFAPLRRLLAVGAKPDRAALADPATDLRKLAAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219169 for 3042 contacts (-72.0/contact) +
2D Compatibility (PS) -39679 + (NN) -13398 + (LL) 2580
1D Compatibility (HY) -14400 + (ID) 4150
Total energy: -288216.0 ( -94.75 by residue)
QMean score : 0.430
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