Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQSKMLIPTLREMPSDAQVISHALMVRA-GYVRQ---VSAGIYAYLPLANRTIEKFKTIMRQEFEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNR-DQSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQSKYRDEKRP-RNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKAYEAIFTRAGLD-FKGIIGDGGAMGGKDSQEFMAVTPNRTDLNRWLVLDKTIPSIDDIPEDVLEEIKVELSAWLVSGEDTIAYSTESSYAANLEMATNEYKPSTKAATFEEVTRVETPNCKSIDEVAGFLSIDENQTIKTLLFIADEQPVVALLVGNDQVNDVKLKNYLAADFLEPASEEQAKEIFGAGFGSLGPVNLPDSVKIIADRKVQDLANAVSGANQDGYHFTGVNPERDFTAEYVDIREVKEGEISPDGKGTLKFARGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGI--GVSRILSAVIEQHARLFVNKTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRNERVGSKFSDSDLIGLPIRVTVGKKASE-GIVEVKIKASGDTIEVHADNLIETLEILTKK |
| 1NYR Chain:A ((236-640)) | ---------------EERKERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRP-DQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPED---KEKYFDD------DDMW------NK-----------------------AENML------------------------------------------KEAADELGL---------SY------------------------------------E---EAIGE-AAFYG--------------------------PKLDVQVKTA-MGKEET-----------------L------------S-TAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEETKG-----------------AFPTWLAPKQVQIIPVNVD--LHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86443 for 3205 contacts (-27.0/contact) +
2D Compatibility (PS) -42021 + (NN) -9927 + (LL) 14772
1D Compatibility (HY) -17600 + (ID) 4050
Total energy: -145269.0 ( -45.33 by residue)
QMean score : 0.346
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