Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFSRERTITEIQNDYKEQVERQNQLKKRRRKGLYRRLTVFGALVFLTAIVLASSVWSQTSSLSAKEEKKEQLEKELKSLKTKQTD-LKEEISKLKDEDYVTELARRDLFMSGDGEIIFNVEKKSK
4OX0 Chain:A ((9-101))
PSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLG--------------------PLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRL-------------
General information:
TITO was launched using:
RESULT:
Template:
4OX0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 31009 for 383 contacts (81.0/contact) +
2D Compatibility (PS) -10228 + (NN) -4695 + (LL) 3044
1D Compatibility (HY) -1200 + (ID) 850
Total energy: 17080.0 ( 44.60 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_4OX0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OX0-query.scw
PDB file :
Tito_Scwrl_4OX0.pdb
: