Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPQVHFDLNEQGKLDVRRAVGTNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVGVLVNPDNTILAAGGFIIQLMPGTDDETITKIEQRLSQVEPISKLIQKGLTPEEILEEVLGEKPEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTTR |
| 1F93 Chain:E ((1-31)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVSKLSQLQTELLAALLESGLSKEALIQALG------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1F93.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2004 for 130 contacts (-15.4/contact) +
2D Compatibility (PS) -3115 + (NN) 1250 + (LL) 16060
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 10691.0 ( 82.24 by residue)
QMean score : 0.650
|
|
|