Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQEREHFQQLLSDYPFQTSIELVAGGDERQHSVYKGLKAVKQEKIVLVHDGARPFIKHEQIDELIAEAEQT-GAAILAVPVKDTIKRVQD--LQVSETIERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMEGGSVRVVEGSYTNIKLTTPDDLTSAEAIMESESGNKHV
1I52 Chain:A ((6-229))
LDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGD-SRFAQLPLANHPQ--ITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCG-FHPQLVEGRADNIKVTRPEDLALAEFYLTR-------
General information:
TITO was launched using:
RESULT:
Template:
1I52.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110822 for 1826 contacts (-60.7/contact) +
2D Compatibility (PS) -23772 + (NN) -8082 + (LL) 76
1D Compatibility (HY) -13600 + (ID) 3900
Total energy: -160100.0 ( -87.68 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_1I52.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I52-query.scw
PDB file :
Tito_Scwrl_1I52.pdb
: